BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A06LP1|AL426300
(789 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1463 1543 0.0
>3x_Contig1463
Length = 9363
Score = 1543 bits (777), Expect = 0.0
Identities = 785/789 (99%)
Strand = Plus / Minus
Query: 1 atcatcaagatttaatggcaaactttgatgaacaatttaatttggagaatgttgactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5425 atcatcaagatttaatggcaaactttgatgaacaatttaatttggagaatgttgactttt 5366
Query: 61 ctagctctgatctcactcgacgtgaaagaattgcttttgtaatatttttgtcttgctttt 120
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5365 ctagctctgatctcactcgacgtgaaacgattgcttttgtaatatttttgtcttgctttt 5306
Query: 121 tcgctcatcagtttcaatgcaaaattgtgttcagcgatcgcttttctaattttcgaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5305 tcgctcatcagtttcaatgcaaaattgtgttcagcgatcgcttttctaattttcgaatct 5246
Query: 181 tcgcattgagtaaatcggaaaagatcaagatggcagaggaggtcttatcagagttgcgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5245 tcgcattgagtaaatcggaaaagatcaagatggcagaggaggtcttatcagagttgcgta 5186
Query: 241 tttacaagcatcgtctcgacattttgaatgaaggttttaaaagatatcttgagagtggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5185 tttacaagcatcgtctcgacattttgaatgaaggttttaaaagatatcttgagagtggac 5126
Query: 301 ttaaaaaggtggatcccaaggagaattcagatttggaagatccgggaatattttggtatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5125 ttaaaaaggtggatcccaaggagaattcagatttggaagatccgggaatattttggtatg 5066
Query: 361 agataactagggaggtttctttaacattttgcgtggtatcaagtgtacatatcatcgcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5065 agataactagggaggtttctttaacattttgcgtggtatcaagtgtacatatcatcgcgc 5006
Query: 421 gactcaacccatcaccagaagtagtcagtatcagccaagaaatgaaaaaattcagaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5005 gactcaacccatcaccagaagtagtcagtatcagccaagaaatgaaaaaattcagaaaga 4946
Query: 481 acatcggtgtctcatggaagattactatgcmatatctcgaacaaaataacagtctctacg 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4945 acatcggtgtctcatggaagattactatgcaatatctcgaacaaaataacagtctctacg 4886
Query: 541 acctctttttcatgtcaaaacttgtcgcgctagttgcagtatcgtatgttggtgagaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4885 acctctttttcatgtcaaaacttgtcgcgctagttgcagtatcgtatgttggtgagaaca 4826
Query: 601 tagcctacttcaaacatgcctcgttcgatgatgtttgctcttttgtaaaaatttgcagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4825 tagcctacttcaaacatgcctcgttcgatgatgtttgctcttttgtaaaaatttgcagat 4766
Query: 661 tcttcgattattctggtataaactgtggttcggttgagaacactagaatacaaagaactt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4765 tcttcgattattctggtataaactgtggttcggttgagaacactagaatacaaagaactt 4706
Query: 721 tgttacaaattcaattcttacttaagatcttagttagatgtgtggtttcagtgcatgtgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4705 tgttacaaattcaattcttacttaagatcttagttagatgtgtggtttcagtgcatgtgc 4646
Query: 781 matcgcata 789
||||||||
Sbjct: 4645 aatcgcata 4637
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6619
Number of Sequences: 1807
Number of extensions: 6619
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 789
length of database: 10,358,551
effective HSP length: 16
effective length of query: 773
effective length of database: 10,329,639
effective search space: 7984810947
effective search space used: 7984810947
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)